Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 TIMM8BP1-201ENST00000452384 211 ntBASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 AC026150.2-201ENST00000564693 1156 ntBASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 AC000095.1-201ENST00000603208 874 ntBASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 MIR6069-201ENST00000620069 79 ntBASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 LINC00628-201ENST00000628516 1289 ntBASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 AL592309.1-201ENST00000443127 649 ntBASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 ALG1L8P-201ENST00000533887 760 ntBASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 AC215219.1-201ENST00000400706 1817 ntBASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.1□□□□□ -0.15
TCRBV3S1A0A5B6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 FAAHP1-202ENST00000446499 1238 ntBASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 LINC01115-203ENST00000606068 577 ntBASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV3S1A0A5B6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms