Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 HSPB1P2-201ENST00000448722 546 ntBASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 AC126915.1-201ENST00000522847 1038 ntBASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 ACTG1P17-201ENST00000558391 1119 ntBASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 MIR4313-201ENST00000580760 101 ntBASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 ECM1P1-201ENST00000604092 1279 ntBASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 AC023908.3-201ENST00000564211 3047 ntBASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 AP003680.1-201ENST00000598970 3660 ntBASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGA9Q9Y5G4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AC087481.3-201ENST00000602886 1894 ntBASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 FNTAP2-201ENST00000430308 634 ntBASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AC005077.2-201ENST00000449786 690 ntBASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AL021578.1-201ENST00000613646 709 ntBASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AC244157.2-201ENST00000616239 1006 ntBASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AC015967.2-201ENST00000624092 234 ntBASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AC006435.4-201ENST00000625037 234 ntBASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AL356737.1-201ENST00000634391 234 ntBASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AC079781.5-202ENST00000641784 3743 ntBASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGA9Q9Y5G4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PCDHGA9Q9Y5G4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGA9Q9Y5G4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms