Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 AL133466.1-201ENST00000447582 150 ntBASIC15.61■□□□□ 0.09
YIPF1Q9Y548 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 CICP12-201ENST00000455801 843 ntBASIC15.61■□□□□ 0.09
YIPF1Q9Y548 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 AL160314.3-201ENST00000556041 767 ntBASIC15.61■□□□□ 0.09
YIPF1Q9Y548 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 MIR6720-201ENST00000611664 98 ntBASIC15.61■□□□□ 0.09
YIPF1Q9Y548 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 Z98259.2-201ENST00000641583 609 ntBASIC15.61■□□□□ 0.09
YIPF1Q9Y548 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.61■□□□□ 0.09
YIPF1Q9Y548 MBLAC2-202ENST00000514906 1936 ntBASIC15.6■□□□□ 0.09
YIPF1Q9Y548 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 RN7SL720P-201ENST00000488178 304 ntBASIC15.6■□□□□ 0.09
YIPF1Q9Y548 HLA-J-204ENST00000495278 958 ntBASIC15.6■□□□□ 0.09
YIPF1Q9Y548 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 SNORD3B-2-202ENST00000571722 791 ntBASIC15.6■□□□□ 0.09
YIPF1Q9Y548 RN7SL574P-201ENST00000581512 297 ntBASIC15.6■□□□□ 0.09
YIPF1Q9Y548 AC005962.1-201ENST00000584100 773 ntBASIC15.6■□□□□ 0.09
YIPF1Q9Y548 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 BX088702.1-201ENST00000610784 235 ntBASIC15.6■□□□□ 0.09
YIPF1Q9Y548 AP000346.4-201ENST00000614827 381 ntBASIC15.6■□□□□ 0.09
YIPF1Q9Y548 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 ZBED1P1-201ENST00000502364 1930 ntBASIC15.6■□□□□ 0.09
YIPF1Q9Y548 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YIPF1Q9Y548 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 AC007292.2-201ENST00000593524 1812 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms