Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 AL161772.1-201ENST00000610494 4412 ntBASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 AL590640.2-201ENST00000457038 527 ntBASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 AC092658.1-201ENST00000505836 891 ntBASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 C18orf15-201ENST00000623680 2534 ntBASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 AL359258.3-201ENST00000622910 2331 ntBASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 RNA5SP486-201ENST00000515961 83 ntBASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 AC138951.2-201ENST00000623455 1161 ntBASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 AC008687.7-202ENST00000637404 953 ntBASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLIP2Q9UDT6 KRT8P14-201ENST00000414254 1442 ntBASIC17.89■□□□□ 0.46
CLIP2Q9UDT6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.89■□□□□ 0.46
CLIP2Q9UDT6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CLIP2Q9UDT6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.89■□□□□ 0.46
CLIP2Q9UDT6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLIP2Q9UDT6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLIP2Q9UDT6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLIP2Q9UDT6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLIP2Q9UDT6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIP2Q9UDT6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CLIP2Q9UDT6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIP2Q9UDT6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIP2Q9UDT6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIP2Q9UDT6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIP2Q9UDT6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms