Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AL359258.3-201ENST00000622910 2331 ntBASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC023824.1-201ENST00000562945 2975 ntBASIC13.87□□□□□ -0.19
LRFN1Q9P244 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC105917.1-201ENST00000506637 2539 ntBASIC13.87□□□□□ -0.19
LRFN1Q9P244 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.86□□□□□ -0.19
LRFN1Q9P244 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AC104306.2-201ENST00000451877 341 ntBASIC13.86□□□□□ -0.19
LRFN1Q9P244 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AC099548.2-209ENST00000480264 625 ntBASIC13.86□□□□□ -0.19
LRFN1Q9P244 RPSAP36-202ENST00000494591 1261 ntBASIC13.86□□□□□ -0.19
LRFN1Q9P244 AL391280.1-201ENST00000506969 1062 ntBASIC13.86□□□□□ -0.19
LRFN1Q9P244 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 PPY2P-201ENST00000582808 702 ntBASIC13.86□□□□□ -0.19
LRFN1Q9P244 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AL022328.3-201ENST00000607943 679 ntBASIC13.86□□□□□ -0.19
LRFN1Q9P244 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AL137783.1-201ENST00000623494 1896 ntBASIC13.86□□□□□ -0.19
LRFN1Q9P244 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRFN1Q9P244 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRFN1Q9P244 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 AL133338.1-201ENST00000565695 1517 ntBASIC13.85□□□□□ -0.19
LRFN1Q9P244 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 AL023775.1-201ENST00000454907 1746 ntBASIC13.85□□□□□ -0.19
LRFN1Q9P244 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.85□□□□□ -0.19
LRFN1Q9P244 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms