Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HCN3Q9P1Z3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HCN3Q9P1Z3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HCN3Q9P1Z3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HCN3Q9P1Z3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HCN3Q9P1Z3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HCN3Q9P1Z3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 KRT8P14-201ENST00000414254 1442 ntBASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 HLA-K-203ENST00000430151 1046 ntBASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 ATP5G2P4-201ENST00000442175 420 ntBASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 CICP4-201ENST00000447359 2812 ntBASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 PDIA3P1-201ENST00000471856 1510 ntBASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 AL360270.3-201ENST00000609118 1348 ntBASIC14.41□□□□□ -0.1
HCN3Q9P1Z3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 MYO15B-237ENST00000642007 4893 ntBASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 C2orf27AP3-201ENST00000434123 579 ntBASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 AC007551.1-201ENST00000457394 519 ntBASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 SNX29P1-201ENST00000548357 1007 ntBASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 GNRHR2-203ENST00000581100 1187 ntBASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 AC017083.2-201ENST00000608069 979 ntBASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 AL354718.3-201ENST00000616414 581 ntBASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 CR382287.1-201ENST00000623954 586 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms