Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 AC134915.1-201ENST00000426461 574 ntBASIC15.59■□□□□ 0.09
PCDH9Q9HC56 ELK1P1-201ENST00000485699 580 ntBASIC15.59■□□□□ 0.09
PCDH9Q9HC56 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 AC107373.2-201ENST00000607735 490 ntBASIC15.59■□□□□ 0.09
PCDH9Q9HC56 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 INTS4P2-202ENST00000614726 2019 ntBASIC15.59■□□□□ 0.09
PCDH9Q9HC56 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 AC055811.4-201ENST00000624039 1754 ntBASIC15.59■□□□□ 0.09
PCDH9Q9HC56 AC136759.1-202ENST00000530858 2194 ntBASIC15.59■□□□□ 0.09
PCDH9Q9HC56 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH9Q9HC56 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDH9Q9HC56 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
PCDH9Q9HC56 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
PCDH9Q9HC56 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH9Q9HC56 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDH9Q9HC56 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH9Q9HC56 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDH9Q9HC56 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH9Q9HC56 AC023090.2-201ENST00000625182 2110 ntBASIC15.58■□□□□ 0.08
PCDH9Q9HC56 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 AC117489.1-201ENST00000625169 3217 ntBASIC15.58■□□□□ 0.08
PCDH9Q9HC56 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 AL645937.2-201ENST00000396808 931 ntBASIC15.58■□□□□ 0.08
PCDH9Q9HC56 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 WASH4P-201ENST00000564273 1246 ntBASIC15.58■□□□□ 0.08
PCDH9Q9HC56 CTBP2P3-201ENST00000585629 1255 ntBASIC15.58■□□□□ 0.08
PCDH9Q9HC56 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 AL137783.1-201ENST00000623494 1896 ntBASIC15.58■□□□□ 0.08
PCDH9Q9HC56 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH9Q9HC56 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDH9Q9HC56 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
PCDH9Q9HC56 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDH9Q9HC56 AL158070.2-201ENST00000623713 1621 ntBASIC15.57■□□□□ 0.08
PCDH9Q9HC56 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDH9Q9HC56 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH9Q9HC56 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH9Q9HC56 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDH9Q9HC56 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDH9Q9HC56 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH9Q9HC56 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms