Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 MEX3B-202ENST00000558133 4333 ntBASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 FES-203ENST00000394302 2133 ntTSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AP000845.1-201ENST00000581677 2131 ntBASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AC004870.1-201ENST00000315132 882 ntBASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AL691432.3-201ENST00000621860 400 ntBASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 PTPRVP-205ENST00000641549 5067 ntBASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 GHSR-202ENST00000427970 912 ntBASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 FAAHP1-202ENST00000446499 1238 ntBASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 AL135744.1-201ENST00000565098 629 ntBASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms