Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BRF2Q9HAW0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.43□□□□□ -0.1
BRF2Q9HAW0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
BRF2Q9HAW0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 OR2I1P-210ENST00000642037 4691 ntBASIC14.42□□□□□ -0.1
BRF2Q9HAW0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 AL354702.1-201ENST00000442006 1960 ntBASIC14.42□□□□□ -0.1
BRF2Q9HAW0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 MIR661-201ENST00000384842 89 ntBASIC14.42□□□□□ -0.1
BRF2Q9HAW0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 AC002472.2-201ENST00000442739 958 ntBASIC14.42□□□□□ -0.1
BRF2Q9HAW0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 AC140912.1-201ENST00000577171 1054 ntBASIC14.42□□□□□ -0.1
BRF2Q9HAW0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 AL136379.1-201ENST00000623471 2642 ntBASIC14.42□□□□□ -0.1
BRF2Q9HAW0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
BRF2Q9HAW0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 AC022137.2-201ENST00000503482 481 ntBASIC14.41□□□□□ -0.1
BRF2Q9HAW0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 AC009486.1-201ENST00000569860 813 ntBASIC14.41□□□□□ -0.1
BRF2Q9HAW0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 CLUHP6-201ENST00000580789 941 ntBASIC14.41□□□□□ -0.1
BRF2Q9HAW0 CTBP2P3-201ENST00000585629 1255 ntBASIC14.41□□□□□ -0.1
BRF2Q9HAW0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 AC008494.3-201ENST00000606615 944 ntBASIC14.41□□□□□ -0.1
BRF2Q9HAW0 CU634019.7-201ENST00000624153 1185 ntBASIC14.41□□□□□ -0.1
BRF2Q9HAW0 FP236241.2-201ENST00000624906 1185 ntBASIC14.41□□□□□ -0.1
BRF2Q9HAW0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms