Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 MST1P2-201ENST00000457982 2291 ntBASIC18.59■□□□□ 0.57
UPF2Q9HAU5 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 AC011474.4-201ENST00000623523 2076 ntBASIC18.59■□□□□ 0.57
UPF2Q9HAU5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
UPF2Q9HAU5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 KRT18P64-201ENST00000434946 1219 ntBASIC18.58■□□□□ 0.56
UPF2Q9HAU5 MKNK2P1-201ENST00000437526 628 ntBASIC18.58■□□□□ 0.56
UPF2Q9HAU5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 MBLAC2-202ENST00000514906 1936 ntBASIC18.58■□□□□ 0.56
UPF2Q9HAU5 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.58■□□□□ 0.56
UPF2Q9HAU5 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 AC018665.1-201ENST00000622927 1362 ntBASIC18.57■□□□□ 0.56
UPF2Q9HAU5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 AC022447.6-201ENST00000515522 438 ntBASIC18.57■□□□□ 0.56
UPF2Q9HAU5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 SAMD11P1-201ENST00000571429 661 ntBASIC18.57■□□□□ 0.56
UPF2Q9HAU5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
UPF2Q9HAU5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms