Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 OR2I1P-210ENST00000642037 4691 ntBASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 BRI3BPP1-201ENST00000594224 787 ntBASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF3BQ9BZI7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 AC027601.5-201ENST00000624065 2482 ntBASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 AP005018.1-201ENST00000525475 301 ntBASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF3BQ9BZI7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 AC098850.1-201ENST00000419919 790 ntBASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 AC022494.1-201ENST00000466044 728 ntBASIC18.02■□□□□ 0.48
UPF3BQ9BZI7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms