Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC097532.2-201ENST00000608279 1682 ntBASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP9-4Q9BYQ2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 GPN1-202ENST00000407583 1395 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AKR1C3-201ENST00000380554 1807 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 HNRNPKP3-203ENST00000534639 1321 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 Y_RNA.72-201ENST00000362894 103 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 ZNF669-203ENST00000366501 730 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 CSF2RA-203ENST00000381500 1283 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 RNU6-43P-201ENST00000384302 107 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 RNU6-878P-201ENST00000384578 110 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 RNU2-51P-201ENST00000410708 197 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AL773545.3-201ENST00000414297 706 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC098592.1-201ENST00000419352 333 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC091799.1-201ENST00000422823 811 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 EIF1P2-201ENST00000428233 350 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 RPL7P4-203ENST00000430239 730 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 APTR-203ENST00000430801 583 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC239727.1-201ENST00000431432 623 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AL160004.2-201ENST00000432935 350 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 CHCHD4P5-201ENST00000436684 427 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 YWHAZP7-201ENST00000436906 631 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 SOX5-204ENST00000441133 638 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 RPSAP11-201ENST00000443010 881 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC010099.2-201ENST00000443177 373 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC105399.1-202ENST00000447303 205 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 RPL39P6-201ENST00000448289 150 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 SSXP1-201ENST00000453640 473 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC022364.2-201ENST00000457963 554 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC008629.2-201ENST00000503783 483 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 GAPDHP56-201ENST00000506031 988 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AF201337.1-201ENST00000520239 748 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 BTF3P1-201ENST00000522014 495 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC124301.2-201ENST00000529781 556 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 CRADD-211ENST00000552983 839 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 OR11H3P-201ENST00000554547 982 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC007424.1-203ENST00000554613 687 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 RBM17P4-201ENST00000558517 1192 ntBASIC6.06□□□□□ -1.44
KRTAP9-4Q9BYQ2 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms