Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 POM121L10P-201ENST00000436994 1285 ntBASIC17.52■□□□□ 0.4
SLF1Q9BQI6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 MESTP3-201ENST00000503460 968 ntBASIC17.52■□□□□ 0.4
SLF1Q9BQI6 FTLP10-202ENST00000505798 471 ntBASIC17.52■□□□□ 0.4
SLF1Q9BQI6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.52■□□□□ 0.4
SLF1Q9BQI6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLF1Q9BQI6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SLF1Q9BQI6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLF1Q9BQI6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLF1Q9BQI6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLF1Q9BQI6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLF1Q9BQI6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SLF1Q9BQI6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLF1Q9BQI6 AC018735.1-201ENST00000437208 1502 ntBASIC17.52■□□□□ 0.39
SLF1Q9BQI6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 AC138035.3-201ENST00000622706 2791 ntBASIC17.51■□□□□ 0.39
SLF1Q9BQI6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 REXO1L4P-201ENST00000605109 1937 ntBASIC17.51■□□□□ 0.39
SLF1Q9BQI6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.51■□□□□ 0.39
SLF1Q9BQI6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLF1Q9BQI6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.5■□□□□ 0.39
SLF1Q9BQI6 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.5■□□□□ 0.39
SLF1Q9BQI6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 HIST2H2BB-201ENST00000449108 381 ntBASIC17.5■□□□□ 0.39
SLF1Q9BQI6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 AC091804.1-201ENST00000486888 567 ntBASIC17.5■□□□□ 0.39
SLF1Q9BQI6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 AC244452.3-201ENST00000636814 210 ntBASIC17.5■□□□□ 0.39
SLF1Q9BQI6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms