Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ARID3AQ99856 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.35■□□□□ 0.37
ARID3AQ99856 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ARID3AQ99856 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.35■□□□□ 0.37
ARID3AQ99856 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ARID3AQ99856 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.35■□□□□ 0.37
ARID3AQ99856 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.35■□□□□ 0.37
ARID3AQ99856 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC17.35■□□□□ 0.37
ARID3AQ99856 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC17.34■□□□□ 0.37
ARID3AQ99856 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ARID3AQ99856 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.34■□□□□ 0.37
ARID3AQ99856 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ARID3AQ99856 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 HAUS4P1-201ENST00000406739 1145 ntBASIC17.34■□□□□ 0.37
ARID3AQ99856 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC17.34■□□□□ 0.37
ARID3AQ99856 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.34■□□□□ 0.37
ARID3AQ99856 AL136982.4-201ENST00000437689 1740 ntBASIC17.34■□□□□ 0.37
ARID3AQ99856 AC245100.5-201ENST00000452108 331 ntBASIC17.34■□□□□ 0.37
ARID3AQ99856 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.34■□□□□ 0.37
ARID3AQ99856 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.34■□□□□ 0.37
ARID3AQ99856 AC109322.1-201ENST00000524499 1264 ntBASIC17.34■□□□□ 0.37
ARID3AQ99856 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ARID3AQ99856 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ARID3AQ99856 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 AL355385.1-201ENST00000606123 409 ntBASIC17.34■□□□□ 0.37
ARID3AQ99856 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.34■□□□□ 0.37
ARID3AQ99856 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.34■□□□□ 0.37
ARID3AQ99856 PEG13-201ENST00000631594 5667 ntBASIC17.34■□□□□ 0.37
ARID3AQ99856 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ARID3AQ99856 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARID3AQ99856 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.33■□□□□ 0.37
ARID3AQ99856 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARID3AQ99856 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.33■□□□□ 0.37
ARID3AQ99856 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
ARID3AQ99856 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
ARID3AQ99856 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ARID3AQ99856 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARID3AQ99856 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
ARID3AQ99856 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC17.33■□□□□ 0.37
ARID3AQ99856 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ARID3AQ99856 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
ARID3AQ99856 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARID3AQ99856 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
ARID3AQ99856 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ARID3AQ99856 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ARID3AQ99856 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ARID3AQ99856 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ARID3AQ99856 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ARID3AQ99856 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.33■□□□□ 0.36
ARID3AQ99856 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.33■□□□□ 0.36
ARID3AQ99856 BANF1P1-201ENST00000553684 263 ntBASIC17.33■□□□□ 0.36
ARID3AQ99856 AC024267.1-201ENST00000582320 895 ntBASIC17.33■□□□□ 0.36
ARID3AQ99856 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.33■□□□□ 0.36
ARID3AQ99856 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.33■□□□□ 0.36
ARID3AQ99856 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.33■□□□□ 0.36
ARID3AQ99856 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC17.33■□□□□ 0.36
ARID3AQ99856 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.33■□□□□ 0.36
ARID3AQ99856 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ARID3AQ99856 MBLAC2-202ENST00000514906 1936 ntBASIC17.33■□□□□ 0.36
ARID3AQ99856 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ARID3AQ99856 AC073869.1-201ENST00000415574 2762 ntBASIC17.33■□□□□ 0.36
ARID3AQ99856 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ARID3AQ99856 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.32■□□□□ 0.36
ARID3AQ99856 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms