Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 AC009090.5-201ENST00000624886 2285 ntBASIC16.1■□□□□ 0.17
YME1L1Q96TA2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 KLF2P1-201ENST00000447438 1042 ntBASIC16.1■□□□□ 0.17
YME1L1Q96TA2 RN7SL8P-201ENST00000461771 266 ntBASIC16.1■□□□□ 0.17
YME1L1Q96TA2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YME1L1Q96TA2 AC010491.1-201ENST00000563101 2797 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 AC006449.5-201ENST00000610658 2098 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 AC006058.4-201ENST00000624016 1670 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 LINC02199-201ENST00000506655 2702 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 AC239868.1-201ENST00000369385 493 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 SCARNA21-201ENST00000517026 139 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 PGAM1P5-201ENST00000548011 764 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 NPM1P43-201ENST00000558669 786 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 AC005962.1-201ENST00000584100 773 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 AC008825.2-201ENST00000603374 718 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 PRAL-201ENST00000624952 3286 ntBASIC16.09■□□□□ 0.17
YME1L1Q96TA2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
YME1L1Q96TA2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms