Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 TCAF1P1-201ENST00000414990 2232 ntBASIC12.3□□□□□ -0.44
RAB40CQ96S21 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AC089987.1-201ENST00000551654 2209 ntBASIC12.29□□□□□ -0.44
RAB40CQ96S21 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AP000347.1-202ENST00000435868 847 ntBASIC12.29□□□□□ -0.44
RAB40CQ96S21 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 SPDYE11-202ENST00000450699 704 ntBASIC12.29□□□□□ -0.44
RAB40CQ96S21 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AC243562.1-201ENST00000560672 389 ntBASIC12.29□□□□□ -0.44
RAB40CQ96S21 LINC01225-203ENST00000563550 1244 ntBASIC12.29□□□□□ -0.44
RAB40CQ96S21 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 SPDYE9P-201ENST00000570642 692 ntBASIC12.29□□□□□ -0.44
RAB40CQ96S21 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 SPDYE10P-202ENST00000612005 668 ntBASIC12.29□□□□□ -0.44
RAB40CQ96S21 SPDYE8P-202ENST00000612377 668 ntBASIC12.29□□□□□ -0.44
RAB40CQ96S21 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 AL354702.1-201ENST00000442006 1960 ntBASIC12.29□□□□□ -0.44
RAB40CQ96S21 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
RAB40CQ96S21 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms