Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
IFT140Q96RY7 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
IFT140Q96RY7 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
IFT140Q96RY7 OR52M2P-201ENST00000414298 959 ntBASIC24.05■■□□□ 1.44
IFT140Q96RY7 AC104961.1-201ENST00000427605 771 ntBASIC24.05■■□□□ 1.44
IFT140Q96RY7 KRT8P30-201ENST00000432100 650 ntBASIC24.05■■□□□ 1.44
IFT140Q96RY7 HNRNPA1P2-207ENST00000432375 960 ntBASIC24.05■■□□□ 1.44
IFT140Q96RY7 NRADDP-201ENST00000437305 691 ntBASIC24.05■■□□□ 1.44
IFT140Q96RY7 SOD2-205ENST00000444946 917 ntTSL 2 BASIC24.05■■□□□ 1.44
IFT140Q96RY7 AC027612.2-202ENST00000445955 1199 ntBASIC24.05■■□□□ 1.44
IFT140Q96RY7 RN7SL788P-201ENST00000460504 316 ntBASIC24.05■■□□□ 1.44
IFT140Q96RY7 RN7SL128P-201ENST00000467883 305 ntBASIC24.05■■□□□ 1.44
IFT140Q96RY7 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC24.05■■□□□ 1.44
IFT140Q96RY7 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC24.05■■□□□ 1.44
IFT140Q96RY7 TYMSP2-201ENST00000589501 424 ntBASIC24.05■■□□□ 1.44
IFT140Q96RY7 AL353622.2-201ENST00000605846 425 ntBASIC24.05■■□□□ 1.44
IFT140Q96RY7 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
IFT140Q96RY7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC24.05■■□□□ 1.44
IFT140Q96RY7 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC24.05■■□□□ 1.44
IFT140Q96RY7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC24.05■■□□□ 1.44
IFT140Q96RY7 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 AL157823.1-201ENST00000403727 628 ntBASIC24.04■■□□□ 1.44
IFT140Q96RY7 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 GRPEL2P1-201ENST00000453145 339 ntBASIC24.04■■□□□ 1.44
IFT140Q96RY7 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 HNRNPA1P5-201ENST00000558213 966 ntBASIC24.04■■□□□ 1.44
IFT140Q96RY7 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC24.04■■□□□ 1.44
IFT140Q96RY7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 AC138761.6-201ENST00000583997 1423 ntBASIC24.04■■□□□ 1.44
IFT140Q96RY7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 AC080080.1-201ENST00000625121 2420 ntBASIC24.04■■□□□ 1.44
IFT140Q96RY7 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC24.04■■□□□ 1.44
IFT140Q96RY7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
IFT140Q96RY7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
IFT140Q96RY7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
IFT140Q96RY7 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 NQO2-204ENST00000380454 851 ntTSL 2 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
IFT140Q96RY7 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 COQ4-204ENST00000608951 781 ntTSL 2 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
IFT140Q96RY7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
IFT140Q96RY7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.03■■□□□ 1.44
IFT140Q96RY7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
IFT140Q96RY7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
IFT140Q96RY7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC24.02■■□□□ 1.44
IFT140Q96RY7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC24.02■■□□□ 1.44
IFT140Q96RY7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
IFT140Q96RY7 AC008536.3-201ENST00000623282 1599 ntBASIC24.02■■□□□ 1.44
IFT140Q96RY7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
IFT140Q96RY7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC24.02■■□□□ 1.44
IFT140Q96RY7 AC022080.1-201ENST00000366255 781 ntBASIC24.02■■□□□ 1.44
IFT140Q96RY7 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
IFT140Q96RY7 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
IFT140Q96RY7 AL080243.1-201ENST00000423293 1060 ntBASIC24.02■■□□□ 1.44
IFT140Q96RY7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC24.02■■□□□ 1.44
IFT140Q96RY7 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
IFT140Q96RY7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
IFT140Q96RY7 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC24.02■■□□□ 1.44
IFT140Q96RY7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC24.02■■□□□ 1.44
IFT140Q96RY7 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC24.02■■□□□ 1.44
IFT140Q96RY7 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC24.02■■□□□ 1.44
IFT140Q96RY7 AC091769.1-201ENST00000619576 568 ntBASIC24.02■■□□□ 1.44
IFT140Q96RY7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
IFT140Q96RY7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
IFT140Q96RY7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
IFT140Q96RY7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms