Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG4P5Q96PW8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CSPG4P5Q96PW8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG4P5Q96PW8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 AL009178.2-201ENST00000597278 2719 ntBASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 FLJ16779-201ENST00000612722 7638 ntBASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG4P5Q96PW8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 AC003102.2-201ENST00000589195 1469 ntBASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.52■□□□□ 0.07
CSPG4P5Q96PW8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 AC097359.2-201ENST00000604992 2389 ntBASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 AP001267.2-201ENST00000532619 2086 ntBASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms