Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FAM90A23P-201ENST00000400136 1395 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 FAM90A21P-201ENST00000510875 1396 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 FAM90A15P-201ENST00000514465 1395 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 FAM90A6P-201ENST00000515148 1394 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 FAM90A16P-201ENST00000526662 1395 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 FAM90A9P-201ENST00000527940 1395 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 FAM90A5P-201ENST00000528738 1395 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 FAM90A14P-201ENST00000530386 1395 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 FAM90A13P-201ENST00000534703 1395 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 AP001282.1-201ENST00000531301 1499 ntBASIC16.22■□□□□ 0.19
LRCH3Q96II8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 CLUHP2-201ENST00000426660 1303 ntBASIC16.22■□□□□ 0.19
LRCH3Q96II8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 MBLAC2-202ENST00000514906 1936 ntBASIC16.22■□□□□ 0.19
LRCH3Q96II8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 AC010740.1-201ENST00000417035 684 ntBASIC16.22■□□□□ 0.19
LRCH3Q96II8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 HLA-DPA2-205ENST00000433582 733 ntBASIC16.22■□□□□ 0.19
LRCH3Q96II8 AC092638.2-201ENST00000441105 947 ntBASIC16.22■□□□□ 0.19
LRCH3Q96II8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 AL353622.2-201ENST00000605846 425 ntBASIC16.22■□□□□ 0.19
LRCH3Q96II8 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 AC012073.1-201ENST00000606114 1108 ntBASIC16.22■□□□□ 0.19
LRCH3Q96II8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH3Q96II8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.22■□□□□ 0.19
LRCH3Q96II8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH3Q96II8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH3Q96II8 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH3Q96II8 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH3Q96II8 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH3Q96II8 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH3Q96II8 HNRNPA1P42-201ENST00000458678 957 ntBASIC16.21■□□□□ 0.19
LRCH3Q96II8 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH3Q96II8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 AC005041.3-201ENST00000606287 649 ntBASIC16.21■□□□□ 0.19
LRCH3Q96II8 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRCH3Q96II8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.21■□□□□ 0.19
LRCH3Q96II8 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRCH3Q96II8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.21■□□□□ 0.18
LRCH3Q96II8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
LRCH3Q96II8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRCH3Q96II8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.21■□□□□ 0.18
LRCH3Q96II8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRCH3Q96II8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRCH3Q96II8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
LRCH3Q96II8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms