Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.39□□□□□ -0.27
APH1AQ96BI3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 AC067750.1-201ENST00000608826 6545 ntBASIC13.39□□□□□ -0.27
APH1AQ96BI3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 MIR658-201ENST00000385210 100 ntBASIC13.39□□□□□ -0.27
APH1AQ96BI3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 AC022210.1-201ENST00000449856 793 ntBASIC13.39□□□□□ -0.27
APH1AQ96BI3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 AP000812.2-201ENST00000538934 718 ntBASIC13.39□□□□□ -0.27
APH1AQ96BI3 AC079316.1-201ENST00000548397 411 ntBASIC13.39□□□□□ -0.27
APH1AQ96BI3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 RHOXF1P1-202ENST00000635473 501 ntBASIC13.39□□□□□ -0.27
APH1AQ96BI3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.39□□□□□ -0.27
APH1AQ96BI3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 FAM197Y7-201ENST00000432892 766 ntBASIC13.38□□□□□ -0.27
APH1AQ96BI3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 AL359881.2-201ENST00000602973 570 ntBASIC13.38□□□□□ -0.27
APH1AQ96BI3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms