Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 TPM3P8-201ENST00000330554 643 ntBASIC13.25□□□□□ -0.29
TMEM54Q969K7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 CR383656.12-201ENST00000549567 513 ntBASIC13.25□□□□□ -0.29
TMEM54Q969K7 AC005225.4-201ENST00000557330 545 ntBASIC13.25□□□□□ -0.29
TMEM54Q969K7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 AC138696.2-201ENST00000607376 223 ntBASIC13.25□□□□□ -0.29
TMEM54Q969K7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.25□□□□□ -0.29
TMEM54Q969K7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 AL354702.1-201ENST00000442006 1960 ntBASIC13.25□□□□□ -0.29
TMEM54Q969K7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.24□□□□□ -0.29
TMEM54Q969K7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 C2orf27AP3-201ENST00000434123 579 ntBASIC13.24□□□□□ -0.29
TMEM54Q969K7 KRT17P7-201ENST00000451704 1104 ntBASIC13.24□□□□□ -0.29
TMEM54Q969K7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 FTH1P14-201ENST00000482930 551 ntBASIC13.24□□□□□ -0.29
TMEM54Q969K7 FTLP10-202ENST00000505798 471 ntBASIC13.24□□□□□ -0.29
TMEM54Q969K7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 AC131206.1-201ENST00000538078 1211 ntBASIC13.24□□□□□ -0.29
TMEM54Q969K7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 AL354718.3-201ENST00000616414 581 ntBASIC13.24□□□□□ -0.29
TMEM54Q969K7 CR382287.1-201ENST00000623954 586 ntBASIC13.24□□□□□ -0.29
TMEM54Q969K7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TMEM54Q969K7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
TMEM54Q969K7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms