Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF4Q92544 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF4Q92544 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 AL390755.1-201ENST00000623716 2027 ntBASIC14.31□□□□□ -0.12
TM9SF4Q92544 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 AC106760.1-201ENST00000508690 800 ntBASIC14.31□□□□□ -0.12
TM9SF4Q92544 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 DUX4L45-201ENST00000566406 1057 ntBASIC14.31□□□□□ -0.12
TM9SF4Q92544 AC097359.3-201ENST00000603982 1210 ntBASIC14.31□□□□□ -0.12
TM9SF4Q92544 AC107373.2-201ENST00000607735 490 ntBASIC14.31□□□□□ -0.12
TM9SF4Q92544 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 AC104581.4-201ENST00000623126 3052 ntBASIC14.31□□□□□ -0.12
TM9SF4Q92544 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 DRD5P1-201ENST00000456605 1438 ntBASIC14.31□□□□□ -0.12
TM9SF4Q92544 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.31□□□□□ -0.12
TM9SF4Q92544 AC007686.3-201ENST00000619017 3487 ntBASIC14.31□□□□□ -0.12
TM9SF4Q92544 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF4Q92544 AC232323.1-201ENST00000540724 2099 ntBASIC14.3□□□□□ -0.12
TM9SF4Q92544 REXO1L5P-201ENST00000622260 2098 ntBASIC14.3□□□□□ -0.12
TM9SF4Q92544 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 RN7SL560P-201ENST00000577943 264 ntBASIC14.3□□□□□ -0.12
TM9SF4Q92544 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.3□□□□□ -0.12
TM9SF4Q92544 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM9SF4Q92544 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms