Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 CNN2P2-201ENST00000443536 909 ntBASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 CNN2P3-201ENST00000450201 906 ntBASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 AL136317.3-201ENST00000618497 906 ntBASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 Z92544.3-201ENST00000624747 417 ntBASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 MIR600HG-201ENST00000449175 5984 ntBASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 AC090505.1-201ENST00000430515 1834 ntBASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 AC125807.1-201ENST00000483097 614 ntBASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 MEIS3P1-201ENST00000495167 958 ntBASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 AC069120.2-201ENST00000524091 540 ntBASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 AC027369.6-201ENST00000525520 931 ntBASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 SNHG9-202ENST00000564014 471 ntBASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
SLC44A1Q8WWI5 AL138799.1-201ENST00000448213 1675 ntBASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 KRT8P22-201ENST00000562317 1415 ntBASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms