Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 IGLL3P-201ENST00000412472 434 ntBASIC11.32□□□□□ -0.6
NUP35Q8NFH5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 AC073648.2-201ENST00000510116 352 ntBASIC11.32□□□□□ -0.6
NUP35Q8NFH5 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 AC026979.3-201ENST00000607315 403 ntBASIC11.32□□□□□ -0.6
NUP35Q8NFH5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 MIR497HG-202ENST00000572453 3838 ntBASIC11.32□□□□□ -0.6
NUP35Q8NFH5 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 CICP16-201ENST00000502609 2813 ntBASIC11.31□□□□□ -0.6
NUP35Q8NFH5 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 AC018665.1-201ENST00000622927 1362 ntBASIC11.31□□□□□ -0.6
NUP35Q8NFH5 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 RHOQP3-201ENST00000437982 621 ntBASIC11.31□□□□□ -0.6
NUP35Q8NFH5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 VN2R19P-201ENST00000442399 1052 ntBASIC11.31□□□□□ -0.6
NUP35Q8NFH5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 SAPCD2P3-201ENST00000455031 850 ntBASIC11.31□□□□□ -0.6
NUP35Q8NFH5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms