Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 DMBT1P1-203ENST00000636837 4628 ntBASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF439Q8NDP4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 AL031595.1-201ENST00000623969 4709 ntBASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 DRD5P1-201ENST00000456605 1438 ntBASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 SPDYE19P-201ENST00000338590 713 ntBASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 RN7SL399P-201ENST00000471648 279 ntBASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 AC004066.1-201ENST00000502488 802 ntBASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 TPRX2P-201ENST00000535362 881 ntBASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 AL662799.1-202ENST00000614205 422 ntBASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF439Q8NDP4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 AC026748.1-201ENST00000624349 3251 ntBASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms