Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 HKR1-225ENST00000592168 566 ntTSL 4 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 LINC01783-202ENST00000614408 828 ntBASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 BX284668.2-205ENST00000619677 828 ntBASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 AC092384.3-202ENST00000564646 2873 ntBASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 AC023157.3-201ENST00000619086 2088 ntBASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 AC092638.2-201ENST00000441105 947 ntBASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP43Q8NDM7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 TSPY25P-201ENST00000429463 745 ntBASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
CFAP43Q8NDM7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 COX20P1-201ENST00000366529 357 ntBASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 RPSAP15-201ENST00000448168 861 ntBASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 NEU3-207ENST00000534628 746 ntTSL 2 BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFAP43Q8NDM7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 RN7SL396P-201ENST00000471086 295 ntBASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 MIR6769A-201ENST00000617340 73 ntBASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CFAP43Q8NDM7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms