Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 RNLS-203ENST00000437752 525 ntTSL 2 BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 RPSAP15-201ENST00000448168 861 ntBASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC168Q8NDH2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 KRT8P31-201ENST00000504812 1408 ntBASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 AC023906.1-201ENST00000486386 453 ntBASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 RN7SL846P-201ENST00000467429 292 ntBASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 AC007326.1-201ENST00000604539 458 ntBASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.45□□□□□ -0.42
CCDC168Q8NDH2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AC013726.1-201ENST00000563747 2285 ntBASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 MARK2P16-201ENST00000605714 1723 ntBASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AC053503.3-201ENST00000448375 114 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms