Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SLC7A15P-201ENST00000424028 1363 ntBASIC15.75■□□□□ 0.11
RFX6Q8HWS3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 AL645937.2-201ENST00000396808 931 ntBASIC15.74■□□□□ 0.11
RFX6Q8HWS3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 AC120045.2-201ENST00000567334 178 ntBASIC15.74■□□□□ 0.11
RFX6Q8HWS3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 AC009118.2-201ENST00000613275 655 ntBASIC15.74■□□□□ 0.11
RFX6Q8HWS3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFX6Q8HWS3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 C1QBPP1-201ENST00000400117 770 ntBASIC15.73■□□□□ 0.11
RFX6Q8HWS3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 AP001582.1-201ENST00000525856 295 ntBASIC15.73■□□□□ 0.11
RFX6Q8HWS3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 SPDYE22P-201ENST00000582158 798 ntBASIC15.73■□□□□ 0.11
RFX6Q8HWS3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 AC007431.3-201ENST00000623221 587 ntBASIC15.73■□□□□ 0.11
RFX6Q8HWS3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.73■□□□□ 0.11
RFX6Q8HWS3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX6Q8HWS3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms