Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 AC018665.1-201ENST00000622927 1362 ntBASIC13.98□□□□□ -0.17
VRK2Q86Y07 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 AC104596.2-201ENST00000512793 793 ntBASIC13.98□□□□□ -0.17
VRK2Q86Y07 RNA5SP421-201ENST00000516864 134 ntBASIC13.98□□□□□ -0.17
VRK2Q86Y07 AP001582.1-201ENST00000525856 295 ntBASIC13.98□□□□□ -0.17
VRK2Q86Y07 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 AC007431.3-201ENST00000623221 587 ntBASIC13.98□□□□□ -0.17
VRK2Q86Y07 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK2Q86Y07 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK2Q86Y07 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 C1QBPP1-201ENST00000400117 770 ntBASIC13.97□□□□□ -0.17
VRK2Q86Y07 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 SPTLC1P1-201ENST00000447199 261 ntBASIC13.97□□□□□ -0.17
VRK2Q86Y07 SERBP1P5-201ENST00000510079 1181 ntBASIC13.97□□□□□ -0.17
VRK2Q86Y07 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms