Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 AC236430.1-201ENST00000402231 743 ntBASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 AC002472.2-201ENST00000442739 958 ntBASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 SPCS2P1-201ENST00000561636 679 ntBASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD1LQ86WJ1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 WASH4P-201ENST00000564273 1246 ntBASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 LRRC59-203ENST00000576448 1531 ntBASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHD1LQ86WJ1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 AC003102.2-201ENST00000589195 1469 ntBASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHD1LQ86WJ1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 AP001063.1-201ENST00000568332 529 ntBASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 AC138761.1-201ENST00000584393 385 ntBASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms