Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 CLK3P2-201ENST00000427566 1453 ntBASIC10.1□□□□□ -0.79
SCXQ7RTU7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 AL691432.1-201ENST00000596308 1422 ntBASIC10.1□□□□□ -0.79
SCXQ7RTU7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 AC004987.2-201ENST00000395959 1148 ntBASIC10.1□□□□□ -0.79
SCXQ7RTU7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 AC098850.1-201ENST00000419919 790 ntBASIC10.1□□□□□ -0.79
SCXQ7RTU7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 AL162274.1-201ENST00000617191 1098 ntBASIC10.1□□□□□ -0.79
SCXQ7RTU7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.1□□□□□ -0.79
SCXQ7RTU7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCXQ7RTU7 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SCXQ7RTU7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SCXQ7RTU7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SCXQ7RTU7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SCXQ7RTU7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SCXQ7RTU7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC10.09□□□□□ -0.79
SCXQ7RTU7 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SCXQ7RTU7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.09□□□□□ -0.79
SCXQ7RTU7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC10.09□□□□□ -0.79
SCXQ7RTU7 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SCXQ7RTU7 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC10.09□□□□□ -0.79
SCXQ7RTU7 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SCXQ7RTU7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SCXQ7RTU7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms