Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 FO393412.1-201ENST00000619841 382 ntBASIC18.6■□□□□ 0.57
RC3H1Q5TC82 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 PRAL-201ENST00000624952 3286 ntBASIC18.59■□□□□ 0.57
RC3H1Q5TC82 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 CR383656.3-201ENST00000551315 183 ntBASIC18.59■□□□□ 0.57
RC3H1Q5TC82 AL022344.2-201ENST00000568976 968 ntBASIC18.59■□□□□ 0.57
RC3H1Q5TC82 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RC3H1Q5TC82 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RC3H1Q5TC82 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 GUSBP10-201ENST00000417412 665 ntBASIC18.58■□□□□ 0.56
RC3H1Q5TC82 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 AC010234.1-201ENST00000494599 870 ntBASIC18.58■□□□□ 0.56
RC3H1Q5TC82 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 KRT8P1-201ENST00000557533 1207 ntBASIC18.58■□□□□ 0.56
RC3H1Q5TC82 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 MIR5196-201ENST00000578146 115 ntBASIC18.58■□□□□ 0.56
RC3H1Q5TC82 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RC3H1Q5TC82 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 AC112693.3-201ENST00000624819 1983 ntBASIC18.57■□□□□ 0.56
RC3H1Q5TC82 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms