Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 BX284668.4-201ENST00000453917 508 ntBASIC15.97■□□□□ 0.15
VARS2Q5ST30 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 AC097478.2-201ENST00000610572 514 ntBASIC15.97■□□□□ 0.15
VARS2Q5ST30 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.97■□□□□ 0.15
VARS2Q5ST30 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARS2Q5ST30 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 MROH4P-201ENST00000431302 1578 ntBASIC15.96■□□□□ 0.15
VARS2Q5ST30 REXO1L2P-201ENST00000425429 2069 ntBASIC15.96■□□□□ 0.15
VARS2Q5ST30 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 RN7SKP230-201ENST00000365642 335 ntBASIC15.96■□□□□ 0.15
VARS2Q5ST30 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 SEPHS1P7-201ENST00000452995 1177 ntBASIC15.96■□□□□ 0.15
VARS2Q5ST30 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 ACTG1P17-201ENST00000558391 1119 ntBASIC15.96■□□□□ 0.15
VARS2Q5ST30 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 AL136301.1-201ENST00000615830 422 ntBASIC15.96■□□□□ 0.15
VARS2Q5ST30 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
VARS2Q5ST30 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VARS2Q5ST30 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VARS2Q5ST30 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
VARS2Q5ST30 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
VARS2Q5ST30 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
VARS2Q5ST30 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.96■□□□□ 0.14
VARS2Q5ST30 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 FXNP2-201ENST00000411625 547 ntBASIC15.95■□□□□ 0.14
VARS2Q5ST30 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 SERPINA13P-202ENST00000478994 924 ntBASIC15.95■□□□□ 0.14
VARS2Q5ST30 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 AC044849.1-201ENST00000519737 1188 ntBASIC15.95■□□□□ 0.14
VARS2Q5ST30 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 AC006927.4-201ENST00000639187 543 ntBASIC15.95■□□□□ 0.14
VARS2Q5ST30 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms