Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 AC067930.6-201ENST00000623257 4947 ntBASIC20.66■□□□□ 0.9
CDCA8Q53HL2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 AC007292.2-201ENST00000593524 1812 ntBASIC20.66■□□□□ 0.9
CDCA8Q53HL2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA8Q53HL2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 POR-201ENST00000394893 2532 ntTSL 5 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 AJ011931.1-201ENST00000618749 2492 ntBASIC20.65■□□□□ 0.9
CDCA8Q53HL2 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 PUDPP3-201ENST00000445368 636 ntBASIC20.65■□□□□ 0.9
CDCA8Q53HL2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 DUX4L46-201ENST00000566845 751 ntBASIC20.65■□□□□ 0.9
CDCA8Q53HL2 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 ABBA01031663.1-201ENST00000635630 790 ntBASIC20.65■□□□□ 0.9
CDCA8Q53HL2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA8Q53HL2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDCA8Q53HL2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
CDCA8Q53HL2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDCA8Q53HL2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 FAM58BP-201ENST00000439056 645 ntBASIC20.64■□□□□ 0.89
CDCA8Q53HL2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 AL008638.5-201ENST00000623814 1298 ntBASIC20.64■□□□□ 0.89
CDCA8Q53HL2 AC018442.1-201ENST00000421439 2061 ntBASIC20.64■□□□□ 0.89
CDCA8Q53HL2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms