Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 AC023908.3-201ENST00000564211 3047 ntBASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 INTS4P1-203ENST00000641008 3683 ntBASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 RN7SL48P-201ENST00000579283 293 ntBASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 AC005912.2-201ENST00000619492 2400 ntBASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN20Q4JDL3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN20Q4JDL3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN20Q4JDL3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN20Q4JDL3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.83■□□□□ 0.13
PTPN20Q4JDL3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN20Q4JDL3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN20Q4JDL3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.83■□□□□ 0.13
PTPN20Q4JDL3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN20Q4JDL3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.83■□□□□ 0.13
PTPN20Q4JDL3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
PTPN20Q4JDL3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 RN7SKP230-201ENST00000365642 335 ntBASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 AC113367.3-201ENST00000508316 1912 ntBASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 AL138725.1-201ENST00000407347 1314 ntBASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN20Q4JDL3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AP001267.2-201ENST00000532619 2086 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AC097359.2-201ENST00000604992 2389 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms