Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 AL662890.1-201ENST00000396818 632 ntBASIC16.31■□□□□ 0.2
CDC42EP1Q00587 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 SLC25A24P2-201ENST00000415059 510 ntBASIC16.31■□□□□ 0.2
CDC42EP1Q00587 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 MIR4783-201ENST00000580343 82 ntBASIC16.31■□□□□ 0.2
CDC42EP1Q00587 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42EP1Q00587 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 AL008718.2-201ENST00000609206 1313 ntBASIC16.3■□□□□ 0.2
CDC42EP1Q00587 ACE3P-201ENST00000423435 1973 ntBASIC16.3■□□□□ 0.2
CDC42EP1Q00587 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 AC022217.1-201ENST00000521069 738 ntBASIC16.3■□□□□ 0.2
CDC42EP1Q00587 MIR3619-201ENST00000579667 83 ntBASIC16.3■□□□□ 0.2
CDC42EP1Q00587 AC090164.2-201ENST00000611487 516 ntBASIC16.3■□□□□ 0.2
CDC42EP1Q00587 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 LINC01101-201ENST00000622953 1884 ntBASIC16.3■□□□□ 0.2
CDC42EP1Q00587 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42EP1Q00587 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 MRPL37P1-201ENST00000592451 1337 ntBASIC16.29■□□□□ 0.2
CDC42EP1Q00587 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 AC104073.2-201ENST00000453737 312 ntBASIC16.29■□□□□ 0.2
CDC42EP1Q00587 CICP12-201ENST00000455801 843 ntBASIC16.29■□□□□ 0.2
CDC42EP1Q00587 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms