Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM4P67936 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 Z97205.2-201ENST00000564697 1639 ntBASIC16.99■□□□□ 0.31
TPM4P67936 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM4P67936 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TPM4P67936 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TPM4P67936 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TPM4P67936 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TPM4P67936 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 MIR193BHG-211ENST00000641433 5365 ntBASIC16.98■□□□□ 0.31
TPM4P67936 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM4P67936 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC16.98■□□□□ 0.31
TPM4P67936 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.98■□□□□ 0.31
TPM4P67936 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TPM4P67936 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TPM4P67936 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TPM4P67936 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TPM4P67936 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM4P67936 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.98■□□□□ 0.31
TPM4P67936 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.98■□□□□ 0.31
TPM4P67936 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.98■□□□□ 0.31
TPM4P67936 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM4P67936 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TPM4P67936 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.98■□□□□ 0.31
TPM4P67936 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TPM4P67936 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.98■□□□□ 0.31
TPM4P67936 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TPM4P67936 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.98■□□□□ 0.31
TPM4P67936 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM4P67936 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.98■□□□□ 0.31
TPM4P67936 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TPM4P67936 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.97■□□□□ 0.31
TPM4P67936 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.97■□□□□ 0.31
TPM4P67936 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC16.97■□□□□ 0.31
TPM4P67936 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM4P67936 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TPM4P67936 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM4P67936 STRCP1-201ENST00000509801 5328 ntBASIC16.97■□□□□ 0.31
TPM4P67936 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TPM4P67936 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM4P67936 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM4P67936 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.97■□□□□ 0.31
TPM4P67936 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.97■□□□□ 0.31
TPM4P67936 SAMD11P1-201ENST00000571429 661 ntBASIC16.97■□□□□ 0.31
TPM4P67936 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.97■□□□□ 0.31
TPM4P67936 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM4P67936 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TPM4P67936 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.97■□□□□ 0.31
TPM4P67936 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.97■□□□□ 0.31
TPM4P67936 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.97■□□□□ 0.31
TPM4P67936 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM4P67936 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM4P67936 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TPM4P67936 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM4P67936 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPM4P67936 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC16.96■□□□□ 0.31
TPM4P67936 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TPM4P67936 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM4P67936 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms