Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 HLA-V-201ENST00000429037 534 ntBASIC13.15□□□□□ -0.3
UBA52P62987 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.15□□□□□ -0.3
UBA52P62987 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 RNA5SP410-201ENST00000516285 106 ntBASIC13.15□□□□□ -0.3
UBA52P62987 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.15□□□□□ -0.3
UBA52P62987 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.15□□□□□ -0.3
UBA52P62987 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.15□□□□□ -0.3
UBA52P62987 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.15□□□□□ -0.3
UBA52P62987 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.15□□□□□ -0.3
UBA52P62987 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.15□□□□□ -0.3
UBA52P62987 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
UBA52P62987 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.15□□□□□ -0.3
UBA52P62987 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.15□□□□□ -0.3
UBA52P62987 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.15□□□□□ -0.3
UBA52P62987 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.15□□□□□ -0.3
UBA52P62987 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
UBA52P62987 ZBED1P1-201ENST00000502364 1930 ntBASIC13.15□□□□□ -0.3
UBA52P62987 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.15□□□□□ -0.3
UBA52P62987 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
UBA52P62987 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.15□□□□□ -0.3
UBA52P62987 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.15□□□□□ -0.31
UBA52P62987 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
UBA52P62987 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
UBA52P62987 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
UBA52P62987 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
UBA52P62987 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
UBA52P62987 AC073439.1-201ENST00000624121 1774 ntBASIC13.15□□□□□ -0.31
UBA52P62987 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.14□□□□□ -0.31
UBA52P62987 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.14□□□□□ -0.31
UBA52P62987 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
UBA52P62987 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
UBA52P62987 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 CR383656.2-201ENST00000548656 2254 ntBASIC13.14□□□□□ -0.31
UBA52P62987 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.14□□□□□ -0.31
UBA52P62987 AC011477.6-201ENST00000604980 1927 ntBASIC13.14□□□□□ -0.31
UBA52P62987 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 HAUS4P1-201ENST00000406739 1145 ntBASIC13.14□□□□□ -0.31
UBA52P62987 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.14□□□□□ -0.31
UBA52P62987 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.14□□□□□ -0.31
UBA52P62987 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 AC098859.1-201ENST00000502915 1238 ntBASIC13.14□□□□□ -0.31
UBA52P62987 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.14□□□□□ -0.31
UBA52P62987 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.14□□□□□ -0.31
UBA52P62987 IGHV3-71-201ENST00000523324 359 ntBASIC13.14□□□□□ -0.31
UBA52P62987 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 API5-211ENST00000534695 560 ntTSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 AC135586.1-201ENST00000539323 574 ntBASIC13.14□□□□□ -0.31
UBA52P62987 AC105021.1-202ENST00000570572 669 ntBASIC13.14□□□□□ -0.31
UBA52P62987 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
UBA52P62987 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.14□□□□□ -0.31
UBA52P62987 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.14□□□□□ -0.31
UBA52P62987 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
UBA52P62987 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 AL731571.1-201ENST00000617058 5428 ntBASIC13.14□□□□□ -0.31
UBA52P62987 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UBA52P62987 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.14□□□□□ -0.31
UBA52P62987 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBA52P62987 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms