Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO4P61968 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
LMO4P61968 PPT1-215ENST00000641471 2368 ntBASIC12.27□□□□□ -0.45
LMO4P61968 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO4P61968 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.27□□□□□ -0.45
LMO4P61968 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.27□□□□□ -0.45
LMO4P61968 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO4P61968 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LMO4P61968 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 AL157791.1-201ENST00000553667 1699 ntBASIC12.26□□□□□ -0.45
LMO4P61968 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
LMO4P61968 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LMO4P61968 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.26□□□□□ -0.45
LMO4P61968 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 RN7SKP214-201ENST00000364208 315 ntBASIC12.26□□□□□ -0.45
LMO4P61968 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LMO4P61968 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO4P61968 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO4P61968 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 AL157407.1-201ENST00000435784 904 ntBASIC12.26□□□□□ -0.45
LMO4P61968 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO4P61968 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.26□□□□□ -0.45
LMO4P61968 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO4P61968 IMP3P2-201ENST00000489760 475 ntBASIC12.26□□□□□ -0.45
LMO4P61968 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.26□□□□□ -0.45
LMO4P61968 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO4P61968 SCARNA21-201ENST00000517026 139 ntBASIC12.26□□□□□ -0.45
LMO4P61968 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO4P61968 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.26□□□□□ -0.45
LMO4P61968 AC009779.1-201ENST00000551138 283 ntBASIC12.26□□□□□ -0.45
LMO4P61968 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
LMO4P61968 AL161670.2-201ENST00000557650 1227 ntBASIC12.26□□□□□ -0.45
LMO4P61968 AC079328.1-201ENST00000560358 952 ntBASIC12.26□□□□□ -0.45
LMO4P61968 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO4P61968 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.26□□□□□ -0.45
LMO4P61968 AC015967.2-201ENST00000624092 234 ntBASIC12.26□□□□□ -0.45
LMO4P61968 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 AC006435.4-201ENST00000625037 234 ntBASIC12.26□□□□□ -0.45
LMO4P61968 AL356737.1-201ENST00000634391 234 ntBASIC12.26□□□□□ -0.45
LMO4P61968 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 FAM90A7P-201ENST00000382628 1395 ntBASIC12.26□□□□□ -0.45
LMO4P61968 FAM90A23P-201ENST00000400136 1395 ntBASIC12.26□□□□□ -0.45
LMO4P61968 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.26□□□□□ -0.45
LMO4P61968 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 KRT8P19-201ENST00000551916 1455 ntBASIC12.26□□□□□ -0.45
LMO4P61968 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.26□□□□□ -0.45
LMO4P61968 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
LMO4P61968 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
LMO4P61968 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO4P61968 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LMO4P61968 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
LMO4P61968 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
LMO4P61968 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms