Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 AL157414.3-201ENST00000624276 1954 ntBASIC14.92□□□□□ -0.02
SRP54P61011 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP54P61011 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP54P61011 OR2I1P-210ENST00000642037 4691 ntBASIC14.92□□□□□ -0.02
SRP54P61011 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SRP54P61011 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP54P61011 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP54P61011 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SRP54P61011 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SRP54P61011 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 AC020907.1-201ENST00000616460 1350 ntBASIC14.91□□□□□ -0.02
SRP54P61011 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP54P61011 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SRP54P61011 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP54P61011 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP54P61011 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 COX5BP1-201ENST00000507622 393 ntBASIC14.91□□□□□ -0.02
SRP54P61011 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.91□□□□□ -0.02
SRP54P61011 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
SRP54P61011 C2orf69P2-201ENST00000562032 1123 ntBASIC14.91□□□□□ -0.02
SRP54P61011 AP006547.1-201ENST00000563435 692 ntBASIC14.91□□□□□ -0.02
SRP54P61011 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.91□□□□□ -0.02
SRP54P61011 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SRP54P61011 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SRP54P61011 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SRP54P61011 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SRP54P61011 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP54P61011 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP54P61011 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SRP54P61011 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP54P61011 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SRP54P61011 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.91□□□□□ -0.02
SRP54P61011 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SRP54P61011 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP54P61011 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SRP54P61011 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.9□□□□□ -0.02
SRP54P61011 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.9□□□□□ -0.02
SRP54P61011 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP54P61011 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.9□□□□□ -0.02
SRP54P61011 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP54P61011 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 REXO1L4P-201ENST00000605109 1937 ntBASIC14.9□□□□□ -0.02
SRP54P61011 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 AC012508.2-201ENST00000567613 1472 ntBASIC14.9□□□□□ -0.02
SRP54P61011 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP54P61011 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 KRT8P44-201ENST00000441609 1350 ntBASIC14.9□□□□□ -0.02
SRP54P61011 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP54P61011 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SRP54P61011 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 MTX1P1-201ENST00000440904 838 ntBASIC14.9□□□□□ -0.02
SRP54P61011 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.9□□□□□ -0.02
SRP54P61011 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms