Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 AC006158.1-201ENST00000610661 249 ntBASIC12.6□□□□□ -0.39
RIPPLY3P57055 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 PAUPAR-201ENST00000630360 2965 ntBASIC12.6□□□□□ -0.39
RIPPLY3P57055 NAP1L6-202ENST00000641404 1222 ntBASIC12.6□□□□□ -0.39
RIPPLY3P57055 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 AC106886.4-201ENST00000623557 2502 ntBASIC12.6□□□□□ -0.39
RIPPLY3P57055 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 TNRC18P2-201ENST00000417666 2714 ntBASIC12.6□□□□□ -0.39
RIPPLY3P57055 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 LYSMD4-203ENST00000378904 2122 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 AGGF1P2-201ENST00000426656 2106 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AC105917.1-201ENST00000506637 2539 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 PTENP1-202ENST00000532280 3996 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 WASH7P-201ENST00000488147 1351 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AL009178.2-201ENST00000597278 2719 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 CCL25-202ENST00000315626 450 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 Z69890.1-201ENST00000382990 339 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 RPL18AP3-201ENST00000462885 528 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AP001582.1-201ENST00000525856 295 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 AL160314.3-201ENST00000556041 767 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 DUT-207ENST00000559416 635 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AL450487.2-201ENST00000615934 407 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AC004923.1-202ENST00000642106 209 ntBASIC12.59□□□□□ -0.39
RIPPLY3P57055 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms