Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXG1P55316 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.19□□□□□ -0.3
FOXG1P55316 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 REXO1L6P-201ENST00000603433 1515 ntBASIC13.19□□□□□ -0.3
FOXG1P55316 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
FOXG1P55316 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
FOXG1P55316 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.19□□□□□ -0.3
FOXG1P55316 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.19□□□□□ -0.3
FOXG1P55316 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 CNN2P10-201ENST00000443067 918 ntBASIC13.19□□□□□ -0.3
FOXG1P55316 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 FTLP10-202ENST00000505798 471 ntBASIC13.19□□□□□ -0.3
FOXG1P55316 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.19□□□□□ -0.3
FOXG1P55316 COX5BP1-201ENST00000507622 393 ntBASIC13.19□□□□□ -0.3
FOXG1P55316 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.19□□□□□ -0.3
FOXG1P55316 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.19□□□□□ -0.3
FOXG1P55316 AC079316.1-201ENST00000548397 411 ntBASIC13.19□□□□□ -0.3
FOXG1P55316 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
FOXG1P55316 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 MIR4683-201ENST00000579659 81 ntBASIC13.19□□□□□ -0.3
FOXG1P55316 MIR4741-201ENST00000579822 90 ntBASIC13.19□□□□□ -0.3
FOXG1P55316 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.19□□□□□ -0.3
FOXG1P55316 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.19□□□□□ -0.3
FOXG1P55316 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.19□□□□□ -0.3
FOXG1P55316 MIR6752-201ENST00000618442 71 ntBASIC13.19□□□□□ -0.3
FOXG1P55316 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.19□□□□□ -0.3
FOXG1P55316 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXG1P55316 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXG1P55316 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
FOXG1P55316 CICP24-201ENST00000605464 2705 ntBASIC13.19□□□□□ -0.3
FOXG1P55316 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FOXG1P55316 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FOXG1P55316 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.18□□□□□ -0.3
FOXG1P55316 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.18□□□□□ -0.3
FOXG1P55316 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 KRT8P4-201ENST00000509735 1454 ntBASIC13.18□□□□□ -0.3
FOXG1P55316 AC003102.2-201ENST00000589195 1469 ntBASIC13.18□□□□□ -0.3
FOXG1P55316 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
FOXG1P55316 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXG1P55316 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXG1P55316 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXG1P55316 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXG1P55316 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.18□□□□□ -0.3
FOXG1P55316 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
FOXG1P55316 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms