Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDKN2DP55273 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDKN2DP55273 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CDKN2DP55273 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKN2DP55273 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.89□□□□□ -0.03
CDKN2DP55273 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.89□□□□□ -0.03
CDKN2DP55273 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.89□□□□□ -0.03
CDKN2DP55273 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKN2DP55273 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKN2DP55273 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKN2DP55273 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKN2DP55273 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKN2DP55273 AC004466.1-201ENST00000599515 1080 ntBASIC14.89□□□□□ -0.03
CDKN2DP55273 AP005019.2-201ENST00000615104 511 ntBASIC14.89□□□□□ -0.03
CDKN2DP55273 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CDKN2DP55273 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKN2DP55273 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
CDKN2DP55273 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 AC027601.5-201ENST00000624065 2482 ntBASIC14.89□□□□□ -0.03
CDKN2DP55273 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CDKN2DP55273 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDKN2DP55273 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKN2DP55273 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKN2DP55273 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKN2DP55273 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDKN2DP55273 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKN2DP55273 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.88□□□□□ -0.03
CDKN2DP55273 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
CDKN2DP55273 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CDKN2DP55273 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.88□□□□□ -0.03
CDKN2DP55273 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 GIMAP3P-201ENST00000495150 836 ntBASIC14.88□□□□□ -0.03
CDKN2DP55273 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 ENPP7P5-201ENST00000541031 1031 ntBASIC14.88□□□□□ -0.03
CDKN2DP55273 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.88□□□□□ -0.03
CDKN2DP55273 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.88□□□□□ -0.03
CDKN2DP55273 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CDKN2DP55273 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKN2DP55273 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDKN2DP55273 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKN2DP55273 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms