Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.5■□□□□ 0.07
AIF1P55008 TPT1P11-201ENST00000458482 498 ntBASIC15.5■□□□□ 0.07
AIF1P55008 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.5■□□□□ 0.07
AIF1P55008 GCOM2-201ENST00000509133 1104 ntBASIC15.5■□□□□ 0.07
AIF1P55008 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
AIF1P55008 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.5■□□□□ 0.07
AIF1P55008 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.5■□□□□ 0.07
AIF1P55008 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.5■□□□□ 0.07
AIF1P55008 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.5■□□□□ 0.07
AIF1P55008 AC106820.3-201ENST00000561653 397 ntBASIC15.5■□□□□ 0.07
AIF1P55008 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.5■□□□□ 0.07
AIF1P55008 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.5■□□□□ 0.07
AIF1P55008 BX088702.1-201ENST00000610784 235 ntBASIC15.5■□□□□ 0.07
AIF1P55008 AL162274.1-201ENST00000617191 1098 ntBASIC15.5■□□□□ 0.07
AIF1P55008 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
AIF1P55008 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
AIF1P55008 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
AIF1P55008 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AIF1P55008 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AIF1P55008 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 AC092135.3-201ENST00000624151 1846 ntBASIC15.5■□□□□ 0.07
AIF1P55008 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AIF1P55008 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.49■□□□□ 0.07
AIF1P55008 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.49■□□□□ 0.07
AIF1P55008 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
AIF1P55008 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.49■□□□□ 0.07
AIF1P55008 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 AC113367.3-201ENST00000508316 1912 ntBASIC15.49■□□□□ 0.07
AIF1P55008 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AIF1P55008 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 AC006001.1-201ENST00000325130 474 ntBASIC15.49■□□□□ 0.07
AIF1P55008 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AIF1P55008 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.49■□□□□ 0.07
AIF1P55008 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.49■□□□□ 0.07
AIF1P55008 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.49■□□□□ 0.07
AIF1P55008 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.49■□□□□ 0.07
AIF1P55008 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.49■□□□□ 0.07
AIF1P55008 AP000812.2-201ENST00000538934 718 ntBASIC15.49■□□□□ 0.07
AIF1P55008 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.49■□□□□ 0.07
AIF1P55008 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.49■□□□□ 0.07
AIF1P55008 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AIF1P55008 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.49■□□□□ 0.07
AIF1P55008 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
AIF1P55008 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AIF1P55008 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.49■□□□□ 0.07
AIF1P55008 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AIF1P55008 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.49■□□□□ 0.07
AIF1P55008 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.49■□□□□ 0.07
AIF1P55008 PKD1P5-201ENST00000532415 10291 ntBASIC15.48■□□□□ 0.07
AIF1P55008 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AIF1P55008 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.48■□□□□ 0.07
AIF1P55008 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AIF1P55008 AC011840.2-201ENST00000563063 1520 ntBASIC15.48■□□□□ 0.07
AIF1P55008 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AIF1P55008 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AIF1P55008 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AIF1P55008 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
AIF1P55008 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
AIF1P55008 MRPL37P1-201ENST00000592451 1337 ntBASIC15.48■□□□□ 0.07
AIF1P55008 AC063926.2-201ENST00000623766 1308 ntBASIC15.48■□□□□ 0.07
AIF1P55008 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.48■□□□□ 0.07
AIF1P55008 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
AIF1P55008 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
AIF1P55008 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AIF1P55008 FLJ16779-201ENST00000612722 7638 ntBASIC15.48■□□□□ 0.07
AIF1P55008 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AIF1P55008 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AIF1P55008 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.48■□□□□ 0.07
AIF1P55008 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AIF1P55008 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms