Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA4P54764 AP001002.3-201ENST00000623482 206 ntBASIC14.51□□□□□ -0.09
EPHA4P54764 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.51□□□□□ -0.09
EPHA4P54764 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
EPHA4P54764 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA4P54764 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
EPHA4P54764 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA4P54764 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA4P54764 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
EPHA4P54764 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA4P54764 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA4P54764 C18orf15-201ENST00000623680 2534 ntBASIC14.51□□□□□ -0.09
EPHA4P54764 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA4P54764 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
EPHA4P54764 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA4P54764 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA4P54764 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA4P54764 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA4P54764 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
EPHA4P54764 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.5□□□□□ -0.09
EPHA4P54764 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.5□□□□□ -0.09
EPHA4P54764 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
EPHA4P54764 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.5□□□□□ -0.09
EPHA4P54764 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.5□□□□□ -0.09
EPHA4P54764 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
EPHA4P54764 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.5□□□□□ -0.09
EPHA4P54764 TLE1P1-201ENST00000422965 589 ntBASIC14.5□□□□□ -0.09
EPHA4P54764 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.5□□□□□ -0.09
EPHA4P54764 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.5□□□□□ -0.09
EPHA4P54764 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.5□□□□□ -0.09
EPHA4P54764 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.5□□□□□ -0.09
EPHA4P54764 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.5□□□□□ -0.09
EPHA4P54764 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.5□□□□□ -0.09
EPHA4P54764 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA4P54764 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
EPHA4P54764 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.49□□□□□ -0.09
EPHA4P54764 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.49□□□□□ -0.09
EPHA4P54764 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 TNRC18P2-201ENST00000417666 2714 ntBASIC14.49□□□□□ -0.09
EPHA4P54764 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.49□□□□□ -0.09
EPHA4P54764 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.49□□□□□ -0.09
EPHA4P54764 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.49□□□□□ -0.09
EPHA4P54764 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.49□□□□□ -0.09
EPHA4P54764 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.49□□□□□ -0.09
EPHA4P54764 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.49□□□□□ -0.09
EPHA4P54764 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.49□□□□□ -0.09
EPHA4P54764 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.49□□□□□ -0.09
EPHA4P54764 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.49□□□□□ -0.09
EPHA4P54764 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.49□□□□□ -0.09
EPHA4P54764 AC007663.3-201ENST00000609632 465 ntBASIC14.49□□□□□ -0.09
EPHA4P54764 AC002472.3-201ENST00000640124 621 ntBASIC14.49□□□□□ -0.09
EPHA4P54764 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
EPHA4P54764 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.49□□□□□ -0.09
EPHA4P54764 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
EPHA4P54764 AC138028.6-201ENST00000616106 1482 ntBASIC14.49□□□□□ -0.09
EPHA4P54764 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EPHA4P54764 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
EPHA4P54764 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.49□□□□□ -0.09
EPHA4P54764 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.49□□□□□ -0.09
EPHA4P54764 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.49□□□□□ -0.09
EPHA4P54764 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA4P54764 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA4P54764 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
EPHA4P54764 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
EPHA4P54764 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA4P54764 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA4P54764 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA4P54764 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA4P54764 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA4P54764 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
EPHA4P54764 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA4P54764 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.48□□□□□ -0.09
EPHA4P54764 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms