Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPT1AP50416 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPT1AP50416 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPT1AP50416 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPT1AP50416 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CPT1AP50416 AC126365.1-201ENST00000578585 1514 ntBASIC16.55■□□□□ 0.24
CPT1AP50416 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
CPT1AP50416 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 TBC1D3J-201ENST00000620719 1426 ntBASIC16.54■□□□□ 0.24
CPT1AP50416 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CPT1AP50416 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CPT1AP50416 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CPT1AP50416 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.54■□□□□ 0.24
CPT1AP50416 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CPT1AP50416 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CPT1AP50416 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.54■□□□□ 0.24
CPT1AP50416 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.54■□□□□ 0.24
CPT1AP50416 AC026316.1-201ENST00000398900 414 ntBASIC16.54■□□□□ 0.24
CPT1AP50416 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.54■□□□□ 0.24
CPT1AP50416 LDHBP1-201ENST00000455730 1119 ntBASIC16.54■□□□□ 0.24
CPT1AP50416 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.54■□□□□ 0.24
CPT1AP50416 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.54■□□□□ 0.24
CPT1AP50416 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.54■□□□□ 0.24
CPT1AP50416 MIR5572-201ENST00000583188 137 ntBASIC16.54■□□□□ 0.24
CPT1AP50416 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.54■□□□□ 0.24
CPT1AP50416 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 AC023024.2-201ENST00000623561 1993 ntBASIC16.54■□□□□ 0.24
CPT1AP50416 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.54■□□□□ 0.24
CPT1AP50416 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.54■□□□□ 0.24
CPT1AP50416 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CPT1AP50416 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPT1AP50416 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.53■□□□□ 0.24
CPT1AP50416 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.53■□□□□ 0.24
CPT1AP50416 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 AC144522.1-201ENST00000625111 1658 ntBASIC16.53■□□□□ 0.24
CPT1AP50416 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.53■□□□□ 0.24
CPT1AP50416 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CPT1AP50416 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.53■□□□□ 0.24
CPT1AP50416 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CPT1AP50416 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CPT1AP50416 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.53■□□□□ 0.24
CPT1AP50416 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.53■□□□□ 0.24
CPT1AP50416 AC069218.1-201ENST00000435269 762 ntBASIC16.53■□□□□ 0.24
CPT1AP50416 RN7SL258P-201ENST00000478664 300 ntBASIC16.53■□□□□ 0.24
CPT1AP50416 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.53■□□□□ 0.24
CPT1AP50416 AC006122.1-201ENST00000493323 440 ntBASIC16.53■□□□□ 0.24
CPT1AP50416 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.53■□□□□ 0.24
CPT1AP50416 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CPT1AP50416 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
CPT1AP50416 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.53■□□□□ 0.24
CPT1AP50416 AC103691.2-201ENST00000618824 433 ntBASIC16.53■□□□□ 0.24
CPT1AP50416 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.53■□□□□ 0.24
CPT1AP50416 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.53■□□□□ 0.24
CPT1AP50416 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.53■□□□□ 0.24
CPT1AP50416 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.53■□□□□ 0.24
CPT1AP50416 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 C18orf15-201ENST00000623680 2534 ntBASIC16.53■□□□□ 0.24
CPT1AP50416 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.53■□□□□ 0.24
CPT1AP50416 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPT1AP50416 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms