Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2CP42773 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2CP42773 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDKN2CP42773 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDKN2CP42773 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2CP42773 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CDKN2CP42773 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2CP42773 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKN2CP42773 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDKN2CP42773 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2CP42773 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKN2CP42773 AC055811.4-201ENST00000624039 1754 ntBASIC14.29□□□□□ -0.12
CDKN2CP42773 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 SBF1P1-201ENST00000444527 5631 ntBASIC14.29□□□□□ -0.12
CDKN2CP42773 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDKN2CP42773 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDKN2CP42773 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDKN2CP42773 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2CP42773 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.29□□□□□ -0.12
CDKN2CP42773 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2CP42773 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKN2CP42773 AC026410.3-201ENST00000514280 936 ntBASIC14.29□□□□□ -0.12
CDKN2CP42773 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2CP42773 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKN2CP42773 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKN2CP42773 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.29□□□□□ -0.12
CDKN2CP42773 AL662799.1-202ENST00000614205 422 ntBASIC14.29□□□□□ -0.12
CDKN2CP42773 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2CP42773 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CDKN2CP42773 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDKN2CP42773 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CDKN2CP42773 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
CDKN2CP42773 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CDKN2CP42773 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKN2CP42773 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKN2CP42773 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKN2CP42773 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CDKN2CP42773 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CDKN2CP42773 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CDKN2CP42773 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.28□□□□□ -0.12
CDKN2CP42773 KRT8P14-201ENST00000414254 1442 ntBASIC14.28□□□□□ -0.12
CDKN2CP42773 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKN2CP42773 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.28□□□□□ -0.12
CDKN2CP42773 VDAC1P7-201ENST00000462417 847 ntBASIC14.28□□□□□ -0.12
CDKN2CP42773 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.28□□□□□ -0.12
CDKN2CP42773 AC004890.2-204ENST00000481968 304 ntBASIC14.28□□□□□ -0.12
CDKN2CP42773 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 AC022447.6-201ENST00000515522 438 ntBASIC14.28□□□□□ -0.12
CDKN2CP42773 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKN2CP42773 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.28□□□□□ -0.12
CDKN2CP42773 AC104794.3-201ENST00000566840 1248 ntBASIC14.28□□□□□ -0.12
CDKN2CP42773 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKN2CP42773 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDKN2CP42773 AL049840.4-201ENST00000602422 811 ntBASIC14.28□□□□□ -0.12
CDKN2CP42773 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDKN2CP42773 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKN2CP42773 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms