Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
HADHAP40939 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HADHAP40939 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.31■□□□□ 0.04
HADHAP40939 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.31■□□□□ 0.04
HADHAP40939 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.31■□□□□ 0.04
HADHAP40939 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.31■□□□□ 0.04
HADHAP40939 AC098850.1-201ENST00000419919 790 ntBASIC15.31■□□□□ 0.04
HADHAP40939 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.31■□□□□ 0.04
HADHAP40939 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.31■□□□□ 0.04
HADHAP40939 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.31■□□□□ 0.04
HADHAP40939 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.31■□□□□ 0.04
HADHAP40939 ENPP7P5-201ENST00000541031 1031 ntBASIC15.31■□□□□ 0.04
HADHAP40939 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.31■□□□□ 0.04
HADHAP40939 AC124283.3-201ENST00000570869 594 ntBASIC15.31■□□□□ 0.04
HADHAP40939 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HADHAP40939 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.31■□□□□ 0.04
HADHAP40939 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.31■□□□□ 0.04
HADHAP40939 KRT8P22-201ENST00000562317 1415 ntBASIC15.31■□□□□ 0.04
HADHAP40939 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HADHAP40939 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.31■□□□□ 0.04
HADHAP40939 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HADHAP40939 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HADHAP40939 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.31■□□□□ 0.04
HADHAP40939 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HADHAP40939 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HADHAP40939 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.3■□□□□ 0.04
HADHAP40939 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.3■□□□□ 0.04
HADHAP40939 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.3■□□□□ 0.04
HADHAP40939 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HADHAP40939 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
HADHAP40939 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 AC018442.1-201ENST00000421439 2061 ntBASIC15.3■□□□□ 0.04
HADHAP40939 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HADHAP40939 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 AL359711.2-201ENST00000563105 872 ntBASIC15.3■□□□□ 0.04
HADHAP40939 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 TP53TG3HP-202ENST00000569755 579 ntBASIC15.3■□□□□ 0.04
HADHAP40939 AC008494.3-201ENST00000606615 944 ntBASIC15.3■□□□□ 0.04
HADHAP40939 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.3■□□□□ 0.04
HADHAP40939 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HADHAP40939 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.29■□□□□ 0.04
HADHAP40939 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HADHAP40939 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
HADHAP40939 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 AL158070.2-201ENST00000623713 1621 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms