Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM23P36406 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.81□□□□□ -0.04
TRIM23P36406 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM23P36406 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM23P36406 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM23P36406 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 AL358472.3-201ENST00000608147 415 ntBASIC14.81□□□□□ -0.04
TRIM23P36406 AP001002.3-201ENST00000623482 206 ntBASIC14.81□□□□□ -0.04
TRIM23P36406 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM23P36406 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.81□□□□□ -0.04
TRIM23P36406 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM23P36406 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM23P36406 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
TRIM23P36406 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRIM23P36406 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
TRIM23P36406 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM23P36406 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
TRIM23P36406 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 ACE3P-201ENST00000423435 1973 ntBASIC14.8□□□□□ -0.04
TRIM23P36406 AC009093.2-202ENST00000620513 2079 ntBASIC14.8□□□□□ -0.04
TRIM23P36406 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM23P36406 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
TRIM23P36406 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM23P36406 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRIM23P36406 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 AC104306.2-201ENST00000451877 341 ntBASIC14.8□□□□□ -0.04
TRIM23P36406 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 AC022494.1-201ENST00000466044 728 ntBASIC14.8□□□□□ -0.04
TRIM23P36406 ALG3P1-201ENST00000508806 1114 ntBASIC14.8□□□□□ -0.04
TRIM23P36406 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM23P36406 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.8□□□□□ -0.04
TRIM23P36406 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM23P36406 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM23P36406 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM23P36406 MIR4683-201ENST00000579659 81 ntBASIC14.8□□□□□ -0.04
TRIM23P36406 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM23P36406 AL118558.3-201ENST00000607414 1079 ntBASIC14.8□□□□□ -0.04
TRIM23P36406 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 AL008638.5-201ENST00000623814 1298 ntBASIC14.8□□□□□ -0.04
TRIM23P36406 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.8□□□□□ -0.04
TRIM23P36406 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM23P36406 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRIM23P36406 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM23P36406 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM23P36406 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM23P36406 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM23P36406 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM23P36406 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM23P36406 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM23P36406 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRIM23P36406 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRIM23P36406 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM23P36406 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 AL354877.1-201ENST00000424412 413 ntBASIC14.79□□□□□ -0.04
TRIM23P36406 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms