Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PDE6BP35913 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.36■□□□□ 0.53
PDE6BP35913 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 AL807761.2-201ENST00000422849 729 ntBASIC18.36■□□□□ 0.53
PDE6BP35913 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.36■□□□□ 0.53
PDE6BP35913 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.36■□□□□ 0.53
PDE6BP35913 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDE6BP35913 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 AP003398.1-201ENST00000531124 318 ntBASIC18.36■□□□□ 0.53
PDE6BP35913 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.36■□□□□ 0.53
PDE6BP35913 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.36■□□□□ 0.53
PDE6BP35913 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PDE6BP35913 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.36■□□□□ 0.53
PDE6BP35913 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.36■□□□□ 0.53
PDE6BP35913 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.36■□□□□ 0.53
PDE6BP35913 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.36■□□□□ 0.53
PDE6BP35913 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.36■□□□□ 0.53
PDE6BP35913 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.36■□□□□ 0.53
PDE6BP35913 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.36■□□□□ 0.53
PDE6BP35913 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.36■□□□□ 0.53
PDE6BP35913 AL161773.1-201ENST00000624845 863 ntBASIC18.36■□□□□ 0.53
PDE6BP35913 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.36■□□□□ 0.53
PDE6BP35913 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.36■□□□□ 0.53
PDE6BP35913 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.36■□□□□ 0.53
PDE6BP35913 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 AL596257.1-201ENST00000641463 2694 ntBASIC18.36■□□□□ 0.53
PDE6BP35913 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.35■□□□□ 0.53
PDE6BP35913 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6BP35913 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6BP35913 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6BP35913 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6BP35913 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6BP35913 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDE6BP35913 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 TSPY25P-201ENST00000429463 745 ntBASIC18.35■□□□□ 0.53
PDE6BP35913 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6BP35913 GCOM2-201ENST00000509133 1104 ntBASIC18.35■□□□□ 0.53
PDE6BP35913 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDE6BP35913 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6BP35913 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDE6BP35913 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.35■□□□□ 0.53
PDE6BP35913 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.34■□□□□ 0.53
PDE6BP35913 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.34■□□□□ 0.53
PDE6BP35913 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDE6BP35913 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.34■□□□□ 0.53
PDE6BP35913 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDE6BP35913 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.34■□□□□ 0.53
PDE6BP35913 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PDE6BP35913 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.34■□□□□ 0.53
PDE6BP35913 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PDE6BP35913 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.34■□□□□ 0.53
PDE6BP35913 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.34■□□□□ 0.53
PDE6BP35913 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.34■□□□□ 0.53
PDE6BP35913 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDE6BP35913 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PDE6BP35913 AC005357.2-202ENST00000590507 1060 ntBASIC18.34■□□□□ 0.53
PDE6BP35913 AC007326.1-201ENST00000604539 458 ntBASIC18.34■□□□□ 0.53
PDE6BP35913 AC009560.1-201ENST00000620208 434 ntBASIC18.34■□□□□ 0.53
PDE6BP35913 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.34■□□□□ 0.53
PDE6BP35913 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.34■□□□□ 0.53
PDE6BP35913 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.34■□□□□ 0.53
PDE6BP35913 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6BP35913 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
PDE6BP35913 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms